IL_9B50_022

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAGG*CGUUAC

Length

11 nucleotides

Bulged bases

9B50|1|AA|U|485, 9B50|1|AA|U|486

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|AA|G|446
9B50|1|AA|G|447
9B50|1|AA|A|448
9B50|1|AA|G|449
9B50|1|AA|G|450
*
9B50|1|AA|C|483
9B50|1|AA|G|484
9B50|1|AA|U|485
9B50|1|AA|U|486
9B50|1|AA|A|487
9B50|1|AA|C|488

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AP

30S ribosomal protein S16