IL_9B50_054
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAG*CGGACC
- Length
- 10 nucleotides
- Bulged bases
- 9B50|1|AA|A|1257, 9B50|1|AA|A|1280, 9B50|1|AA|C|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B50_054 not in the Motif Atlas
- Geometric match to IL_8B0X_054
- Geometric discrepancy: 0.1683
- The information below is about IL_8B0X_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9B50|1|AA|G|1255
9B50|1|AA|A|1256
9B50|1|AA|A|1257
9B50|1|AA|G|1258
*
9B50|1|AA|C|1277
9B50|1|AA|G|1278
9B50|1|AA|G|1279
9B50|1|AA|A|1280
9B50|1|AA|C|1281
9B50|1|AA|C|1282
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AC
- 30S ribosomal protein S3
- Chain AI
- 30S ribosomal protein S9
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14
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