IL_9B50_072
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CCAGUAG*CGAACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B50_072 not in the Motif Atlas
- Geometric match to IL_8B0X_071
- Geometric discrepancy: 0.0512
- The information below is about IL_8B0X_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02666.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9B50|1|BA|C|239
9B50|1|BA|C|240
9B50|1|BA|A|241
9B50|1|BA|G|242
9B50|1|BA|U|243
9B50|1|BA|A|244
9B50|1|BA|G|245
*
9B50|1|BA|C|253
9B50|1|BA|G|254
9B50|1|BA|A|255
9B50|1|BA|A|256
9B50|1|BA|C|257
9B50|1|BA|G|258
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B3
- 50S ribosomal protein L35
- Chain BL
- 50S ribosomal protein L15
Coloring options: