IL_9B50_104
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAG*CGGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9B50_104 not in the Motif Atlas
- Geometric match to IL_8B0X_103
- Geometric discrepancy: 0.0801
- The information below is about IL_8B0X_103
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
9B50|1|BA|G|1038
9B50|1|BA|A|1039
9B50|1|BA|A|1040
9B50|1|BA|G|1041
*
9B50|1|BA|C|1114
9B50|1|BA|G|1115
9B50|1|BA|G|1116
9B50|1|BA|C|1117
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B4
- 50S ribosomal protein L36
- Chain BG
- 50S ribosomal protein L6
- Chain BM
- 50S ribosomal protein L16
- Chain BV
- 50S ribosomal protein L25
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