IL_9B50_153

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAG*CGACCUUGAAAUAC

Length

18 nucleotides

Bulged bases

9B50|1|BA|A|2163, 9B50|1|BA|C|2164, 9B50|1|BA|U|2167, 9B50|1|BA|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|G|2124
9B50|1|BA|G|2125
9B50|1|BA|A|2126
9B50|1|BA|G|2127
*
9B50|1|BA|C|2161
9B50|1|BA|G|2162
9B50|1|BA|A|2163
9B50|1|BA|C|2164
9B50|1|BA|C|2165
9B50|1|BA|U|2166
9B50|1|BA|U|2167
9B50|1|BA|G|2168
9B50|1|BA|A|2169
9B50|1|BA|A|2170
9B50|1|BA|A|2171
9B50|1|BA|U|2172
9B50|1|BA|A|2173
9B50|1|BA|C|2174

Current chains

Chain BA

23S ribosomal RNA

Nearby chains