IL_9B51_150

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCUU*AAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9B51_150 not in the Motif Atlas

Geometric match to IL_5EW4_002

Geometric discrepancy: 0.1937

The information below is about IL_5EW4_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

9B51|1|BA|C|2103
9B51|1|BA|C|2104
9B51|1|BA|U|2105
9B51|1|BA|U|2106
*
9B51|1|BA|A|2183
9B51|1|BA|A|2184
9B51|1|BA|U|2185
9B51|1|BA|G|2186

Current chains

Chain BA

23S ribosomal RNA

Nearby chains