IL_9BDL_011
3D structure
- PDB id
- 9BDL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with angiogenin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UCCUUU*AUUCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BDL_011 not in the Motif Atlas
- Homologous match to IL_8C3A_401
- Geometric discrepancy: 0.1532
- The information below is about IL_8C3A_401
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02934.1
- Basepair signature
- cWW-L-R-L-cWW-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
9BDL|1|A18S|U|116
9BDL|1|A18S|C|117
9BDL|1|A18S|C|118
9BDL|1|A18S|U|119
9BDL|1|A18S|U|120
9BDL|1|A18S|U|121
*
9BDL|1|A18S|A|343
9BDL|1|A18S|U|344
9BDL|1|A18S|U|345
9BDL|1|A18S|C|346
9BDL|1|A18S|G|347
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS04
- 40S ribosomal protein S4
- Chain AS08
- 40S ribosomal protein S8
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