IL_9BDL_118

3D structure

PDB id

9BDL (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9BDL|1|A28S|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDL|1|A28S|A|466
9BDL|1|A28S|U|467
9BDL|1|A28S|U|468
9BDL|1|A28S|C|469
9BDL|1|A28S|A|470
9BDL|1|A28S|A|471
9BDL|1|A28S|C|472
*
9BDL|1|A28S|G|682
9BDL|1|A28S|C|683
9BDL|1|A28S|G|684
9BDL|1|A28S|C|685
9BDL|1|A28S|A|686
9BDL|1|A28S|U|687
9BDL|1|A28S|U|688
9BDL|1|A28S|U|689

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL06

60S ribosomal protein L6

Chain ALNW

60S ribosomal protein L28