IL_9BDN_280

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

9BDN|1|A28S|G|119, 9BDN|1|A28S|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A28S|C|118
9BDN|1|A28S|G|119
9BDN|1|A28S|A|120
9BDN|1|A28S|A|121
9BDN|1|A28S|U|122
*
9BDN|1|A28S|A|147
9BDN|1|A28S|A|148
9BDN|1|A28S|A|149
9BDN|1|A28S|U|150
9BDN|1|A28S|G|151
9BDN|1|A28S|U|152
9BDN|1|A28S|G|153

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain A58S

5.8S ribosomal RNA; 5.8S rRNA

Chain AL08

Large ribosomal subunit protein eL8

Chain AL15

60S ribosomal protein L15

Chain AL35

60S ribosomal protein L35