IL_9BDN_291

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A28S|C|4466
9BDN|1|A28S|A|4467
9BDN|1|A28S|U|4468
9BDN|1|A28S|U|4469
9BDN|1|A28S|G|4470
*
9BDN|1|A28S|C|4485
9BDN|1|A28S|C|4486
9BDN|1|A28S|A|4487
9BDN|1|A28S|A|4488
9BDN|1|A28S|G|4489
9BDN|1|A28S|C|4490
9BDN|1|A28S|G|4491

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL03

60S ribosomal protein L3

Chain AL09

60S ribosomal protein L9

Chain AL16

Large ribosomal subunit protein uL13

Chain AL23

60S ribosomal protein L23

Chain AL40

Large ribosomal subunit protein eL40