IL_9BDP_045

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUU*AAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GUU,AAC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9BDP_045 not in the Motif Atlas

Homologous match to IL_8C3A_435

Geometric discrepancy: 0.5895

The information below is about IL_8C3A_435

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

9BDP|1|A18S|G|881
9BDP|1|A18S|U|882
9BDP|1|A18S|U|883
*
9BDP|1|A18S|A|903
9BDP|1|A18S|A|904
9BDP|1|A18S|C|905

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AL19

60S ribosomal protein L19

Chain AS11

40S ribosomal protein S11