IL_9BDP_119

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9BDP|1|A28S|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|A|466
9BDP|1|A28S|U|467
9BDP|1|A28S|U|468
9BDP|1|A28S|C|469
9BDP|1|A28S|A|470
9BDP|1|A28S|A|471
9BDP|1|A28S|C|472
*
9BDP|1|A28S|G|682
9BDP|1|A28S|C|683
9BDP|1|A28S|G|684
9BDP|1|A28S|C|685
9BDP|1|A28S|A|686
9BDP|1|A28S|U|687
9BDP|1|A28S|U|688
9BDP|1|A28S|U|689

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL06

60S ribosomal protein L6

Chain ALNW

60S ribosomal protein L28