IL_9BDP_334

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

9BDP|1|A28S|G|119, 9BDP|1|A28S|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|C|118
9BDP|1|A28S|G|119
9BDP|1|A28S|A|120
9BDP|1|A28S|A|121
9BDP|1|A28S|U|122
*
9BDP|1|A28S|A|147
9BDP|1|A28S|A|148
9BDP|1|A28S|A|149
9BDP|1|A28S|U|150
9BDP|1|A28S|G|151
9BDP|1|A28S|U|152
9BDP|1|A28S|G|153

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain A58S

5.8S ribosomal RNA; 5.8S rRNA

Chain AL08

Large ribosomal subunit protein eL8

Chain AL15

60S ribosomal protein L15

Chain AL35

60S ribosomal protein L35