IL_9BH5_029

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

CAAAG*UUGCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|A5|C|709
9BH5|1|A5|A|710
9BH5|1|A5|A|711
9BH5|1|A5|A|712
9BH5|1|A5|G|713
*
9BH5|1|A5|U|726
9BH5|1|A5|U|727
9BH5|1|A5|G|728
9BH5|1|A5|C|729
9BH5|1|A5|G|730

Current chains

Chain A5

28S rRNA

Nearby chains

Chain CC

Large ribosomal subunit protein uL4

Chain CL

Large ribosomal subunit protein eL13

Chain CN

Large ribosomal subunit protein eL15

Chain Ca

Large ribosomal subunit protein uL15