IL_9BH5_119

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

UUG*CCAAG

Length

8 nucleotides

Bulged bases

9BH5|1|A5|A|3023

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|A5|U|3003
9BH5|1|A5|U|3004
9BH5|1|A5|G|3005
*
9BH5|1|A5|C|3020
9BH5|1|A5|C|3021
9BH5|1|A5|A|3022
9BH5|1|A5|A|3023
9BH5|1|A5|G|3024

Current chains

Chain A5

28S rRNA

Nearby chains

Chain CH

Large ribosomal subunit protein uL6

Chain CO

Large ribosomal subunit protein uL13

Chain Cm

Ubiquitin-ribosomal protein eL40 fusion protein