IL_9BH5_126

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

ACAUUU*ACCAU

Length

11 nucleotides

Bulged bases

9BH5|1|A5|C|3205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|A5|A|3159
9BH5|1|A5|C|3160
9BH5|1|A5|A|3161
9BH5|1|A5|U|3162
9BH5|1|A5|U|3163
9BH5|1|A5|U|3164
*
9BH5|1|A5|A|3204
9BH5|1|A5|C|3205
9BH5|1|A5|C|3206
9BH5|1|A5|A|3207
9BH5|1|A5|U|3208

Current chains

Chain A5

28S rRNA

Nearby chains

Chain CB

Large ribosomal subunit protein uL3

Chain CV

Large ribosomal subunit protein uL14

Chain CW

Large ribosomal subunit protein eL24