IL_9BH5_127

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

GUUCAUA*UGAAGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|A5|G|3166
9BH5|1|A5|U|3167
9BH5|1|A5|U|3168
9BH5|1|A5|C|3169
9BH5|1|A5|A|3170
9BH5|1|A5|U|3171
9BH5|1|A5|A|3172
*
9BH5|1|A5|U|3197
9BH5|1|A5|G|3198
9BH5|1|A5|A|3199
9BH5|1|A5|A|3200
9BH5|1|A5|G|3201
9BH5|1|A5|C|3202

Current chains

Chain A5

28S rRNA

Nearby chains

Chain CB

Large ribosomal subunit protein uL3

Chain CV

Large ribosomal subunit protein uL14

Chain CW

Large ribosomal subunit protein eL24

Chain Cd

Large ribosomal subunit protein eL31