IL_9BH5_139

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

UGUAUUC*GUUGAG

Length

13 nucleotides

Bulged bases

9BH5|1|A5|G|3483

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|A5|U|3444
9BH5|1|A5|G|3445
9BH5|1|A5|U|3446
9BH5|1|A5|A|3447
9BH5|1|A5|U|3448
9BH5|1|A5|U|3449
9BH5|1|A5|C|3450
*
9BH5|1|A5|G|3480
9BH5|1|A5|U|3481
9BH5|1|A5|U|3482
9BH5|1|A5|G|3483
9BH5|1|A5|A|3484
9BH5|1|A5|G|3485

Current chains

Chain A5

28S rRNA

Nearby chains

Chain CB

Large ribosomal subunit protein uL3

Chain CW

Large ribosomal subunit protein eL24

Chain Cd

Large ribosomal subunit protein eL31