IL_9BH5_160

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

UAGUG*CUGA

Length

9 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|B2|U|195
9BH5|1|B2|A|196
9BH5|1|B2|G|197
9BH5|1|B2|U|226
9BH5|1|B2|G|227
*
9BH5|1|B2|C|234
9BH5|1|B2|U|235
9BH5|1|B2|G|236
9BH5|1|B2|A|237

Current chains

Chain B2

18S rRNA

Nearby chains

Chain AE

Small ribosomal subunit protein eS4

Chain AG

Small ribosomal subunit protein eS6

Chain AI

Small ribosomal subunit protein eS8

Chain AL

Small ribosomal subunit protein uS17