IL_9BH5_188
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CAUC*GUCUUUCG
- Length
- 12 nucleotides
- Bulged bases
- 9BH5|1|B2|C|1055, 9BH5|1|B2|U|1057, 9BH5|1|B2|C|1059
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BH5|1|B2|C|999
9BH5|1|B2|A|1000
9BH5|1|B2|U|1001
9BH5|1|B2|C|1002
*
9BH5|1|B2|G|1053
9BH5|1|B2|U|1054
9BH5|1|B2|C|1055
9BH5|1|B2|U|1056
9BH5|1|B2|U|1057
9BH5|1|B2|U|1058
9BH5|1|B2|C|1059
9BH5|1|B2|G|1060
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AC
- Small ribosomal subunit protein uS5
- Chain AL
- Small ribosomal subunit protein uS17
- Chain AN
- Small ribosomal subunit protein uS15
- Chain AW
- Ribosomal Protein, Small subunit
- Chain AX
- Small ribosomal subunit protein uS12
- Chain Ab
- Small ribosomal subunit protein eS27
Coloring options: