IL_9BH5_203
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 9BH5|1|B2|A|1383
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_203 not in the Motif Atlas
- Homologous match to IL_8C3A_458
- Geometric discrepancy: 0.0912
- The information below is about IL_8C3A_458
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 112
Unit IDs
9BH5|1|B2|C|1239
9BH5|1|B2|G|1240
*
9BH5|1|B2|C|1382
9BH5|1|B2|A|1383
9BH5|1|B2|G|1384
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AC
- Small ribosomal subunit protein uS5
- Chain AD
- Small ribosomal subunit protein uS3
- Chain AQ
- Small ribosomal subunit protein uS9
- Chain AU
- Small ribosomal subunit protein uS10
- Chain Ad
- Small ribosomal subunit protein uS14
- Chain DB
- Transfer RNA; tRNA
- Chain DC
- mRNA
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