IL_9BH5_206
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GUG*UUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BH5_206 not in the Motif Atlas
- Geometric match to IL_4WF9_017
- Geometric discrepancy: 0.1818
- The information below is about IL_4WF9_017
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 95
Unit IDs
9BH5|1|B2|G|1431
9BH5|1|B2|U|1432
9BH5|1|B2|G|1433
*
9BH5|1|B2|U|1486
9BH5|1|B2|U|1487
9BH5|1|B2|C|1488
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein uS7
- Chain AQ
- Small ribosomal subunit protein uS9
- Chain AS
- Small ribosomal subunit protein uS13
- Chain AT
- Small ribosomal subunit protein eS19
- Chain AZ
- Small ribosomal subunit protein eS25
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