IL_9BH5_223
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- UUAG*CCCUUAAAACA
- Length
- 15 nucleotides
- Bulged bases
- 9BH5|1|A5|U|1749, 9BH5|1|A5|A|1750, 9BH5|1|A5|C|1887, 9BH5|1|A5|U|1888
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BH5|1|A5|U|1748
9BH5|1|A5|U|1749
9BH5|1|A5|A|1750
9BH5|1|A5|G|1751
*
9BH5|1|A5|C|1885
9BH5|1|A5|C|1886
9BH5|1|A5|C|1887
9BH5|1|A5|U|1888
9BH5|1|A5|U|1889
9BH5|1|A5|A|1890
9BH5|1|A5|A|1891
9BH5|1|A5|A|1892
9BH5|1|A5|A|1893
9BH5|1|A5|C|1894
9BH5|1|A5|A|1895
Current chains
- Chain A5
- 28S rRNA
Nearby chains
- Chain CA
- Large ribosomal subunit protein uL2
- Chain Cg
- Large ribosomal subunit protein eL34
- Chain Cp
- Large ribosomal subunit protein eL43
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