IL_9BH5_226
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CAUCUCUAU*AGCUUAUG
- Length
- 17 nucleotides
- Bulged bases
- 9BH5|1|A5|A|3292, 9BH5|1|A5|A|3298, 9BH5|1|A5|G|3317, 9BH5|1|A5|C|3318, 9BH5|1|A5|U|3320
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BH5|1|A5|C|3291
9BH5|1|A5|A|3292
9BH5|1|A5|U|3293
9BH5|1|A5|C|3294
9BH5|1|A5|U|3295
9BH5|1|A5|C|3296
9BH5|1|A5|U|3297
9BH5|1|A5|A|3298
9BH5|1|A5|U|3299
*
9BH5|1|A5|A|3316
9BH5|1|A5|G|3317
9BH5|1|A5|C|3318
9BH5|1|A5|U|3319
9BH5|1|A5|U|3320
9BH5|1|A5|A|3321
9BH5|1|A5|U|3322
9BH5|1|A5|G|3323
Current chains
- Chain A5
- 28S rRNA
Nearby chains
- Chain CE
- Large ribosomal subunit protein eL6
- Chain CH
- Large ribosomal subunit protein uL6
- Chain CM
- Large ribosomal subunit protein eL14
- Chain CO
- Large ribosomal subunit protein uL13
- Chain CS
- Large ribosomal subunit protein eL20
- Chain Cf
- Large ribosomal subunit protein eL33
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