IL_9BLN_008
3D structure
- PDB id
- 9BLN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 9BLN|1|A|C|65, 9BLN|1|A|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BLN_008 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.2132
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9BLN|1|A|U|63
9BLN|1|A|A|64
9BLN|1|A|C|65
9BLN|1|A|G|66
9BLN|1|A|C|67
9BLN|1|A|A|68
*
9BLN|1|A|U|81
9BLN|1|A|G|82
9BLN|1|A|A|83
9BLN|1|A|A|84
9BLN|1|A|A|85
Current chains
- Chain A
- rRNA
Nearby chains
- Chain S
- Small ribosomal subunit protein eS6
- Chain T
- Small ribosomal subunit protein eS24
Coloring options: