IL_9BLN_094
3D structure
- PDB id
- 9BLN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BLN_094 not in the Motif Atlas
- Homologous match to IL_8C3A_480
- Geometric discrepancy: 0.1713
- The information below is about IL_8C3A_480
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9BLN|1|A|C|1742
9BLN|1|A|G|1743
9BLN|1|A|G|1744
9BLN|1|A|A|1745
9BLN|1|A|U|1746
*
9BLN|1|A|A|1788
9BLN|1|A|G|1789
9BLN|1|A|A|1790
9BLN|1|A|A|1791
9BLN|1|A|G|1792
Current chains
- Chain A
- rRNA
Nearby chains
- Chain R
- Small ribosomal subunit protein eS8
- Chain S
- Small ribosomal subunit protein eS6
Coloring options: