IL_9BSS_012

3D structure

PDB id

9BSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

45SRbgA particle in complex with RbgA and YphC. Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9BSS_012 not in the Motif Atlas

Homologous match to IL_9DFE_011

Geometric discrepancy: 0.3889

The information below is about IL_9DFE_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

9BSS|1|A|U|336
9BSS|1|A|A|337
9BSS|1|A|G|338
*
9BSS|1|A|C|387
9BSS|1|A|A|388
9BSS|1|A|A|389
9BSS|1|A|A|390
9BSS|1|A|A|391

Current chains

Chain A

23S rRNA

Nearby chains

Chain P

Large ribosomal subunit protein uL24