IL_9BSS_025
3D structure
- PDB id
- 9BSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 45SRbgA particle in complex with RbgA and YphC. Class B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 9BSS|1|A|G|823, 9BSS|1|A|A|835, 9BSS|1|A|A|836, 9BSS|1|A|U|837
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9BSS_025 not in the Motif Atlas
- Geometric match to IL_8VTW_022
- Geometric discrepancy: 0.1083
- The information below is about IL_8VTW_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
9BSS|1|A|G|822
9BSS|1|A|G|823
9BSS|1|A|G|824
*
9BSS|1|A|C|834
9BSS|1|A|A|835
9BSS|1|A|A|836
9BSS|1|A|U|837
9BSS|1|A|C|838
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL2
- Chain E
- Large ribosomal subunit protein uL4
- Chain N
- Large ribosomal subunit protein uL22
- Chain U
- Large ribosomal subunit protein bL34
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