IL_9BUP_057
3D structure
- PDB id
- 9BUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Single particle CryoEM structure of the Pf80S ribosome in non-rotated PRE state (nrt A-P-E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGUUU*AUCUCC
- Length
- 11 nucleotides
- Bulged bases
- 9BUP|1|AA|C|1571
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BUP|1|AA|G|1530
9BUP|1|AA|G|1531
9BUP|1|AA|U|1532
9BUP|1|AA|U|1533
9BUP|1|AA|U|1534
*
9BUP|1|AA|A|1569
9BUP|1|AA|U|1570
9BUP|1|AA|C|1571
9BUP|1|AA|U|1572
9BUP|1|AA|C|1573
9BUP|1|AA|C|1574
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A2
- 60S ribosomal protein L28
- Chain A8
- 60S ribosomal protein L32
- Chain AC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AF
- 60S ribosomal protein L4
- Chain AO
- 60S ribosomal protein L27a
- Chain AS
- 60S ribosomal protein L18-2
Coloring options: