IL_9BUP_123
3D structure
- PDB id
- 9BUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Single particle CryoEM structure of the Pf80S ribosome in non-rotated PRE state (nrt A-P-E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AAAUUAUAUA*UAAAUAAU
- Length
- 18 nucleotides
- Bulged bases
- 9BUP|1|AA|A|3584, 9BUP|1|AA|A|3590, 9BUP|1|AA|U|3616
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BUP|1|AA|A|3583
9BUP|1|AA|A|3584
9BUP|1|AA|A|3585
9BUP|1|AA|U|3586
9BUP|1|AA|U|3587
9BUP|1|AA|A|3588
9BUP|1|AA|U|3589
9BUP|1|AA|A|3590
9BUP|1|AA|U|3591
9BUP|1|AA|A|3592
*
9BUP|1|AA|U|3612
9BUP|1|AA|A|3613
9BUP|1|AA|A|3614
9BUP|1|AA|A|3615
9BUP|1|AA|U|3616
9BUP|1|AA|A|3617
9BUP|1|AA|A|3618
9BUP|1|AA|U|3619
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain AH
- 60S ribosomal protein L6
- Chain AI
- 60S ribosomal protein L6
- Chain AK
- 60S ribosomal protein L13
- Chain AN
- 60S ribosomal protein L14
- Chain AU
- 60S ribosomal protein L18a
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