IL_9BUP_204
3D structure
- PDB id
- 9BUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Single particle CryoEM structure of the Pf80S ribosome in non-rotated PRE state (nrt A-P-E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UAUAUAACGA*UUUAUCAAUAUA
- Length
- 22 nucleotides
- Bulged bases
- 9BUP|1|SA|U|1728, 9BUP|1|SA|A|1818, 9BUP|1|SA|U|1819
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BUP|1|SA|U|1724
9BUP|1|SA|A|1725
9BUP|1|SA|U|1726
9BUP|1|SA|A|1727
9BUP|1|SA|U|1728
9BUP|1|SA|A|1729
9BUP|1|SA|A|1730
9BUP|1|SA|C|1731
9BUP|1|SA|G|1732
9BUP|1|SA|A|1733
*
9BUP|1|SA|U|1815
9BUP|1|SA|U|1816
9BUP|1|SA|U|1817
9BUP|1|SA|A|1818
9BUP|1|SA|U|1819
9BUP|1|SA|C|1820
9BUP|1|SA|A|1821
9BUP|1|SA|A|1822
9BUP|1|SA|U|1823
9BUP|1|SA|A|1824
9BUP|1|SA|U|1825
9BUP|1|SA|A|1826
Current chains
- Chain SA
- 18S ribosomal RNA
Nearby chains
- Chain S2
- 40S ribosomal protein S25
- Chain SD
- 40S ribosomal protein S3
- Chain SI
- 40S ribosomal protein S5
- Chain SM
- 40S ribosomal protein S16
- Chain SN
- 40S ribosomal protein S20e
- Chain ST
- 40S ribosomal protein S29
- Chain SY
- 40S ribosomal protein S19
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