IL_9C3H_001
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- GUGGAUC*GUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_001 not in the Motif Atlas
- Geometric match to IL_5TBW_015
- Geometric discrepancy: 0.0622
- The information below is about IL_5TBW_015
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_66414.7
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
9C3H|1|L1|G|13
9C3H|1|L1|U|14
9C3H|1|L1|G|15
9C3H|1|L1|G|16
9C3H|1|L1|A|17
9C3H|1|L1|U|18
9C3H|1|L1|C|19
*
9C3H|1|L5|G|415
9C3H|1|L5|U|416
9C3H|1|L5|G|417
9C3H|1|L5|A|418
9C3H|1|L5|A|419
9C3H|1|L5|A|420
9C3H|1|L5|C|421
Current chains
- Chain L1
- 5.8S rRNA
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- Large ribosomal subunit protein uL4
- Chain LI
- Large ribosomal subunit protein eL32
- Chain Lh
- Large ribosomal subunit protein uL22
- Chain NC
- Nascent chain
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