IL_9C3H_009
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_009 not in the Motif Atlas
- Homologous match to IL_8C3A_005
- Geometric discrepancy: 0.1769
- The information below is about IL_8C3A_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_35728.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9C3H|1|L5|C|30
9C3H|1|L5|U|31
9C3H|1|L5|G|32
9C3H|1|L5|A|33
9C3H|1|L5|A|34
9C3H|1|L5|U|35
9C3H|1|L5|U|36
9C3H|1|L5|U|37
*
9C3H|1|L5|A|44
9C3H|1|L5|U|45
9C3H|1|L5|U|46
9C3H|1|L5|A|47
9C3H|1|L5|G|48
9C3H|1|L5|U|49
9C3H|1|L5|C|50
9C3H|1|L5|A|51
9C3H|1|L5|G|52
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LN
- Large ribosomal subunit protein eL15
- Chain LP
- Large ribosomal subunit protein eL37
- Chain LQ
- Large ribosomal subunit protein eL13
- Chain La
- Large ribosomal subunit protein uL15
- Chain Le
- Large ribosomal subunit protein eL42
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