IL_9C3H_024

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

GGUC*GC

Length

6 nucleotides

Bulged bases

9C3H|1|L5|G|483, 9C3H|1|L5|U|484

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9C3H_024 not in the Motif Atlas

Geometric match to IL_7OS0_002

Geometric discrepancy: 0.1138

The information below is about IL_7OS0_002

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71421.2

Basepair signature

cWW-cWW

Number of instances in this motif group

35

Unit IDs

9C3H|1|L5|G|482
9C3H|1|L5|G|483
9C3H|1|L5|U|484
9C3H|1|L5|C|485
*
9C3H|1|L5|G|671
9C3H|1|L5|C|672

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Ll

Large ribosomal subunit protein eL28