IL_9C3H_027

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

GCG*CCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9C3H_027 not in the Motif Atlas

Geometric match to IL_5J7L_273

Geometric discrepancy: 0.3214

The information below is about IL_5J7L_273

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

9C3H|1|L5|G|497
9C3H|1|L5|C|498
9C3H|1|L5|G|499
*
9C3H|1|L5|C|655
9C3H|1|L5|C|656
9C3H|1|L5|C|657

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL4