IL_9C3H_032

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

9C3H|1|L5|A|932, 9C3H|1|L5|C|934, 9C3H|1|L5|A|935, 9C3H|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|A|732
9C3H|1|L5|A|733
9C3H|1|L5|G|734
9C3H|1|L5|G|735
*
9C3H|1|L5|C|928
9C3H|1|L5|A|929
9C3H|1|L5|G|930
9C3H|1|L5|C|931
9C3H|1|L5|A|932
9C3H|1|L5|G|933
9C3H|1|L5|C|934
9C3H|1|L5|A|935
9C3H|1|L5|C|936
9C3H|1|L5|U|937

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL4

Chain LM

Large ribosomal subunit protein eL14

Chain LS

Large ribosomal subunit protein eL20