IL_9C3H_106

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

9C3H|1|L5|G|2903, 9C3H|1|L5|G|3590, 9C3H|1|L5|A|3596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|G|2901
9C3H|1|L5|G|2902
9C3H|1|L5|G|2903
9C3H|1|L5|U|2904
9C3H|1|L5|C|2905
*
9C3H|1|L5|G|3589
9C3H|1|L5|G|3590
9C3H|1|L5|C|3591
9C3H|1|L5|G|3592
9C3H|1|L5|C|3593
9C3H|1|L5|C|3594
9C3H|1|L5|U|3595
9C3H|1|L5|A|3596
9C3H|1|L5|G|3597
9C3H|1|L5|C|3598

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

Large ribosomal subunit protein eL19

Chain SI

Small ribosomal subunit protein eS8

Chain SL

Small ribosomal subunit protein uS17