IL_9C3H_120
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- GA*UACC
- Length
- 6 nucleotides
- Bulged bases
- 9C3H|1|L5|A|4385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C3H_120 not in the Motif Atlas
- Homologous match to IL_8C3A_099
- Geometric discrepancy: 0.1335
- The information below is about IL_8C3A_099
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
9C3H|1|L5|G|3916
9C3H|1|L5|A|3917
*
9C3H|1|L5|U|4384
9C3H|1|L5|A|4385
9C3H|1|L5|C|4386
9C3H|1|L5|C|4387
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LD
- Large ribosomal subunit protein uL2
- Chain LN
- Large ribosomal subunit protein eL15
- Chain NC
- Nascent chain
- Chain S4
- Transfer RNA; tRNA
Coloring options: