IL_9C3H_158

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

GCG*CC

Length

5 nucleotides

Bulged bases

9C3H|1|L5|C|4900

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9C3H_158 not in the Motif Atlas

Geometric match to IL_7PMM_001

Geometric discrepancy: 0.2493

The information below is about IL_7PMM_001

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

9C3H|1|L5|G|4899
9C3H|1|L5|C|4900
9C3H|1|L5|G|4901
*
9C3H|1|L5|C|4920
9C3H|1|L5|C|4921

Current chains

Chain L5

28S rRNA

Nearby chains