IL_9C3H_248

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

9C3H|1|S2|A|1580, 9C3H|1|S2|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|S2|G|1550
9C3H|1|S2|U|1551
9C3H|1|S2|G|1552
9C3H|1|S2|C|1553
9C3H|1|S2|C|1554
9C3H|1|S2|U|1555
9C3H|1|S2|A|1556
9C3H|1|S2|C|1557
9C3H|1|S2|C|1558
*
9C3H|1|S2|G|1577
9C3H|1|S2|U|1578
9C3H|1|S2|A|1579
9C3H|1|S2|A|1580
9C3H|1|S2|C|1581
9C3H|1|S2|C|1582

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SK

Small ribosomal subunit protein uS3

Chain SM

Small ribosomal subunit protein eS10

Chain SZ

Small ribosomal subunit protein uS10

Chain Sf

Small ribosomal subunit protein uS14