IL_9C8K_059
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUGC*GAGG
- Length
- 9 nucleotides
- Bulged bases
- 9C8K|1|1|G|1398
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C8K_059 not in the Motif Atlas
- Geometric match to IL_8BH9_001
- Geometric discrepancy: 0.3046
- The information below is about IL_8BH9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65740.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
9C8K|1|1|C|1395
9C8K|1|1|A|1396
9C8K|1|1|U|1397
9C8K|1|1|G|1398
9C8K|1|1|C|1399
*
9C8K|1|1|G|1447
9C8K|1|1|A|1448
9C8K|1|1|G|1449
9C8K|1|1|G|1450
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain Q
- uS9
- Chain R
- Small ribosomal subunit protein eS17
- Chain U
- uS10
- Chain g
- Receptor for Activated C Kinase 1 (RACK1)
Coloring options: