IL_9C8K_076
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9C8K_076 not in the Motif Atlas
- Homologous match to IL_8C3A_480
- Geometric discrepancy: 0.2497
- The information below is about IL_8C3A_480
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9C8K|1|1|C|1742
9C8K|1|1|G|1743
9C8K|1|1|G|1744
9C8K|1|1|A|1745
9C8K|1|1|U|1746
*
9C8K|1|1|A|1788
9C8K|1|1|G|1789
9C8K|1|1|A|1790
9C8K|1|1|A|1791
9C8K|1|1|G|1792
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain G
- eS6
- Chain I
- eS8
Coloring options: