3D structure

PDB id
9CL9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
WT 12C IM fraction, B-b3 with RluB bound
Experimental method
ELECTRON MICROSCOPY
Resolution
5.04 Å

Loop

Sequence
UUAGU*ACAAAAA
Length
12 nucleotides
Bulged bases
9CL9|1|CA|A|346
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9CL9|1|CA|U|292
9CL9|1|CA|U|293
9CL9|1|CA|A|294
9CL9|1|CA|G|295
9CL9|1|CA|U|296
*
9CL9|1|CA|A|342
9CL9|1|CA|C|343
9CL9|1|CA|A|344
9CL9|1|CA|A|345
9CL9|1|CA|A|346
9CL9|1|CA|A|347
9CL9|1|CA|A|348

Current chains

Chain CA
23S rRNA

Nearby chains

Chain U
Large ribosomal subunit protein uL24

Coloring options:

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