IL_9CL9_014

3D structure

PDB id

9CL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT 12C IM fraction, B-b3 with RluB bound

Experimental method

ELECTRON MICROSCOPY

Resolution

5.04 Å

Loop

Sequence

UCGACCCC*GGAAACAGGUUAAUAUUCCUGUA

Length

31 nucleotides

Bulged bases

9CL9|1|CA|U|1396, 9CL9|1|CA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CL9|1|CA|U|1344
9CL9|1|CA|C|1345
9CL9|1|CA|G|1346
9CL9|1|CA|A|1347
9CL9|1|CA|C|1348
9CL9|1|CA|C|1349
9CL9|1|CA|C|1350
9CL9|1|CA|C|1351
*
9CL9|1|CA|G|1381
9CL9|1|CA|G|1382
9CL9|1|CA|A|1383
9CL9|1|CA|A|1384
9CL9|1|CA|A|1385
9CL9|1|CA|C|1386
9CL9|1|CA|A|1387
9CL9|1|CA|G|1388
9CL9|1|CA|G|1389
9CL9|1|CA|U|1390
9CL9|1|CA|U|1391
9CL9|1|CA|A|1392
9CL9|1|CA|A|1393
9CL9|1|CA|U|1394
9CL9|1|CA|A|1395
9CL9|1|CA|U|1396
9CL9|1|CA|U|1397
9CL9|1|CA|C|1398
9CL9|1|CA|C|1399
9CL9|1|CA|U|1400
9CL9|1|CA|G|1401
9CL9|1|CA|U|1402
9CL9|1|CA|A|1403

Current chains

Chain CA

23S rRNA

Nearby chains

Chain T

Large ribosomal subunit protein uL23