IL_9CPA_042

3D structure

PDB id

9CPA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a Mammalian DHX29-bound 43S Pre-initiation Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GGCGCCCCCUCGA*UCCCGCGGGGCCC

Length

26 nucleotides

Bulged bases

9CPA|1|2|C|749, 9CPA|1|2|C|781

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CPA|1|2|G|747
9CPA|1|2|G|748
9CPA|1|2|C|749
9CPA|1|2|G|750
9CPA|1|2|C|751
9CPA|1|2|C|752
9CPA|1|2|C|753
9CPA|1|2|C|754
9CPA|1|2|C|755
9CPA|1|2|U|756
9CPA|1|2|C|757
9CPA|1|2|G|758
9CPA|1|2|A|759
*
9CPA|1|2|U|776
9CPA|1|2|C|777
9CPA|1|2|C|778
9CPA|1|2|C|779
9CPA|1|2|G|780
9CPA|1|2|C|781
9CPA|1|2|G|782
9CPA|1|2|G|783
9CPA|1|2|G|784
9CPA|1|2|G|785
9CPA|1|2|C|786
9CPA|1|2|C|787
9CPA|1|2|C|788

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain I

40S ribosomal protein S6