IL_9CPA_045

3D structure

PDB id

9CPA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a Mammalian DHX29-bound 43S Pre-initiation Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CPA|1|2|G|803
9CPA|1|2|A|804
9CPA|1|2|A|805
9CPA|1|2|A|806
9CPA|1|2|A|807
9CPA|1|2|A|808
9CPA|1|2|A|809
9CPA|1|2|U|810
9CPA|1|2|U|811
*
9CPA|1|2|A|845
9CPA|1|2|C|846
9CPA|1|2|C|847
9CPA|1|2|G|848
9CPA|1|2|C|849
9CPA|1|2|A|850
9CPA|1|2|G|851
9CPA|1|2|C|852

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S4

Chain L

Ribosomal protein S9 (Predicted)

Chain N

Ribosomal protein S11

Chain Y

Ribosomal protein S15a