IL_9CXF_007

3D structure

PDB id

9CXF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Rail RNA motif

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GUAUUAGUAG*CGAAACUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CXF|1|A|G|122
9CXF|1|A|U|123
9CXF|1|A|A|124
9CXF|1|A|U|125
9CXF|1|A|U|126
9CXF|1|A|A|127
9CXF|1|A|G|128
9CXF|1|A|U|129
9CXF|1|A|A|130
9CXF|1|A|G|131
*
9CXF|1|A|C|153
9CXF|1|A|G|154
9CXF|1|A|A|155
9CXF|1|A|A|156
9CXF|1|A|A|157
9CXF|1|A|C|158
9CXF|1|A|U|159
9CXF|1|A|U|160
9CXF|1|A|C|161

Current chains

Chain A

RNA (200-MER)

Nearby chains