IL_9D89_072
3D structure
- PDB id
- 9D89 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- GC*GCAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9D89_072 not in the Motif Atlas
- Geometric match to IL_8VTW_075
- Geometric discrepancy: 0.04
- The information below is about IL_8VTW_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22551.1
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 9
Unit IDs
9D89|1|D|G|1937
9D89|1|D|C|1938
*
9D89|1|D|G|1968
9D89|1|D|C|1969
9D89|1|D|A|1970
9D89|1|D|C|1971
Current chains
- Chain D
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: