IL_9E0N_019

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

UUAAC*GGUAG

Length

10 nucleotides

Bulged bases

9E0N|1|A|U|714

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_019 not in the Motif Atlas

Geometric match to IL_9DFE_014

Geometric discrepancy: 0.2493

The information below is about IL_9DFE_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66798.3

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

7

Unit IDs

9E0N|1|A|U|699
9E0N|1|A|U|700
9E0N|1|A|A|701
9E0N|1|A|A|702
9E0N|1|A|C|703
*
9E0N|1|A|G|712
9E0N|1|A|G|713
9E0N|1|A|U|714
9E0N|1|A|A|715
9E0N|1|A|G|716

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

Large ribosomal subunit protein uL4

Chain M

Large ribosomal subunit protein uL15