IL_9E0N_021
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- GAAGC*GUGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 9E0N|1|A|G|916, 9E0N|1|A|G|920
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0N_021 not in the Motif Atlas
- Geometric match to IL_9DFE_016
- Geometric discrepancy: 0.2311
- The information below is about IL_9DFE_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9E0N|1|A|G|789
9E0N|1|A|A|790
9E0N|1|A|A|791
9E0N|1|A|G|792
9E0N|1|A|C|793
*
9E0N|1|A|G|914
9E0N|1|A|U|915
9E0N|1|A|G|916
9E0N|1|A|A|917
9E0N|1|A|U|918
9E0N|1|A|A|919
9E0N|1|A|G|920
9E0N|1|A|C|921
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL4
- Chain M
- Large ribosomal subunit protein uL15
Coloring options: